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Agriculture and Agri-Food Canada

Génotypage d'échantillons de tissus porcins à l'aide du séquençage du génome entier à faible couverture propre au porc (SkimSEEK) et du pipeline d'imputation de Gencove

Other
Estimated value
Not disclosed
Deadline
January 15, 2025
Published
December 30, 2024
Type
Services
Explore similarEngineering and Research and Technology Based Services

Full description

This Advance Contract Award Notice (ACAN) is a public notice indicating to the supplier community that Agriculture and Agri-Food Canada intends to award a service contract to a pre-identified supplier, thereby allowing other suppliers to signal their interest in bidding, by submitting a Statement of Capabilities. If no supplier submits, a Statement of Capabilities that meets the requirements set out in the ACAN, on or before the closing date stated in this ACAN, the Contracting Officer may then proceed with the award to the pre-identified supplier.

REQUIREMENTS:

Agriculture and Agri-Food Canada will be contracting services from Neogen Canada Inc. to process and analyze swine tissue samples using swine-specific low-pass skim sequencing (SkimSEEK) and Gencove’s imputation pipeline to ensure compatibility with previous projects. The work will take place over a 27 month period as follows:

1,400 swine samples will be completed before March 31, 2025, with 2,000 samples completed during year 2, and 2,000 samples completed during year 3.

CRITERIA FOR ASSESSMENT OF THE STATEMENT OF CAPABILITIES:

Any interested supplier must demonstrate by way of a statement of capabilities that it meets the following requirements:

Have authorized use in Canada of Gencove’s proprietary pipeline for genotype imputation from low-pass whole genome sequencing.

CONTRACT PERIOD:

From January 2025 to March 31, 2027

ESTIMATED VALUE: $ 309,600.00 CAD

PRE-IDENTIFIED SUPPLIER:

Neogen Canada Inc.
7323 Roper Road NW
Edmonton AB T6E 0W4

SOLE SOURCE JUSTIFICATION:

SNP panel offered by Neogen (SkimSeek) has a unique combination of genetic markers. This panel has been used in historical samples (multiple studies) and the new samples need to be compatible in order to be able to combine the data accurately.

Neogen has exclusive use in Canada of Gencove’s proprietary pipeline for genotype imputation from low-pass whole genome sequencing, which utilizes a combination of open-source and custom software to deliver accurate variant calls across the genome.

Government Contracts Regulations Exception:
Section 6 (d) has been invoked for this procurement as only one supplier (person/firm) is capable of performing the Contract.

ACAN NOTICE:

You are hereby notified that the government intends to negotiate with one firm only as identified above. Should you have any questions concerning this requirement, contact the Contracting Authority.

An Advance Contract Award Notice (ACAN) allows departments and agencies to post a notice, for no less than fifteen (15) calendar days, indicating to the supplier community that it intends to award a good, service or construction contract to a pre-identified contractor. If no other supplier submits, on or before the closing date, a Statement of Capabilities that meets the requirements set out in the ACAN, the Contracting Authority may then proceed with the award. However, should a Statement of Capabilities be found to meet the requirements set out in the ACAN, then the Contracting Authority will proceed to a full tendering process.

STATEMENT OF CAPABILITIES CLOSING DATE AND TIME:

The closing date and time for acceptance of Statement of Capabilities is January 15, 2025 at 11:00 am CST.

Suppliers who consider themselves fully qualified and available to provide the services described herein, may submit a statement of capabilities by Email to the contact person identified in this Notice on or before the closing date of this notice. The statement of capabilities must clearly demonstrate how the supplier meets the advertised requirements.

The Solicitation Number, Name of Contracting Authority and closing date of the ACAN must appear within your Statement of Capabilities.

The Crown retains the right to negotiate with suppliers on any procurement.

CONTRACTING AUTHORITY:
Desta Kissack, Supervisor, Procurement and Materiel Management
Agriculture and Agri-Food Canada
Western Service Centre
4-303 Main Street
Winnipeg MB R3C 3G7
Phone: (204) 583-8127
Email: d••••••••@•••.••.ca

AI Analysis

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Basic information

Reference
cb-284-49959331
Solicitation no.
01R11-25-217
Buyer
Agriculture and Agri-Food Canada
Notice type
Advance Contract Award Notice
Method
Advance contract award notice
Procurement category
*SRV
Trade agreements
*Canada-European Union Comprehensive Economic and Trade Agreement (CETA) *Canada-Panama Free Trade Agreement *World Trade Organization Agreement on Government Procurement (WTO GPA) *Canada-Peru Free Trade Agreement (CPFTA) *Canada-Colombia Free Trade Agreement *Canada-Ukraine Free Trade Agreement (CUFTA) *Canada-UK Trade Continuity Agreement (Canada-UK TCA) *Canada-Chile Free Trade Agreement (CCFTA) *Canada-Korea Free Trade Agreement (CKFTA) *Canada-Honduras Free Trade Agreement *Comprehensive and Progressive Agreement for Trans-Pacific Partnership (CPTPP) *Canadian Free Trade Agreement (CFTA)
Estimated value
Not disclosed
Source
canadabuys

Classification & terms

UNSPSC
UNSPSC 81000000 — Engineering and Research and Technology Based Services

Delivery & regions

Regions of delivery
*Lacombe

Key dates

Published
December 30, 2024
Closes
January 15, 2025
Amendment no.
001

Likely incumbents

(5)

Suppliers who have won similar work from this buyer before.

  1. 1
    Genome Quebec
    3 contracts won· latest January 17, 2025
    CAD $406K
    total awarded
  2. 2
    Tato Recruiting Inc., S.i. Systems ULC, in Joint Venture
    2 contracts won· latest May 7, 2025
    CAD $1.4M
    total awarded
  3. 3
    TATO RECRUITING INC. AND S.I. SYSTEMS ULC IN JOINT VENTURE
    1 contract won· latest November 21, 2023
    CAD $1.5M
    total awarded
  4. 4
    Experis Canada
    1 contract won· latest October 11, 2024
    CAD $500K
    total awarded
  5. 5
    SGS North America Inc.
    1 contract won· latest September 27, 2024
    CAD $135.5K
    total awarded

Genome Quebec is the most likely incumbent, based on how often and how recently they have won this buyer’s work in this category. To displace them, expect to need a clearly stronger proposition or price.

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